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Select item 88477331.

Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package

Emma J Griffiths, Ruth E Timme, Catarina Inês Mendes, Andrew J Page, Nabil-Fareed Alikhan, Dan Fornika, Finlay Maguire, Josefina Campos, Daniel Park, Idowu B Olawoye, Paul E Oluniyi, Dominique Anderson, Alan Christoffels, Anders Gonçalves da Silva, Rhiannon Cameron, Damion Dooley, Lee S Katz, Allison Black, Ilene Karsch-Mizrachi, Tanya Barrett, Anjanette Johnston, Thomas R Connor, Samuel M Nicholls, Adam A Witney, Gregory H Tyson, Simon H Tausch, Amogelang R Raphenya, Brian Alcock, David M Aanensen, Emma Hodcroft, William W L Hsiao, Ana Tereza R Vasconcelos, Duncan R MacCannell

Gigascience. 2022; 11: giac003. Published online 2022 Feb 16. doi: 10.1093/gigascience/giac003

PMCID:: PMC8847733

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Select item 84816132.

Primordial Germ Cell Specification in Vertebrate Embryos: Phylogenetic Distribution and Conserved Molecular Features of Preformation and Induction

Christina L. Hansen, Francisco Pelegri

Front Cell Dev Biol. 2021; 9: 730332. Published online 2021 Sep 16. doi: 10.3389/fcell.2021.730332

PMCID:: PMC8481613

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Select item 97279103.

Neuronal-epithelial cross-talk drives acinar specification via NRG1-ERBB3-mTORC2 signaling

Alison J. May, Aaron J. Mattingly, Eliza A. Gaylord, Nathan Griffin, Sonia Sudiwala, Noel Cruz-Pacheco, Elaine Emmerson, Seayar Mohabbat, Sara Nathan, Hanan Sinada, Isabelle M. A. Lombaert, Sarah M. Knox

Dev Cell. Author manuscript; available in PMC 2023 Nov 21.

Published in final edited form as: Dev Cell. 2022 Nov 21; 57(22): 2550–2565.e5. doi: 10.1016/j.devcel.2022.10.011

PMCID:: PMC9727910

Article PDF–3.7M

Select item 54513224.

SBML Level 3 package: Groups, Version 1 Release 1

Michael Hucka, Lucian P. Smith

J Integr Bioinform. Author manuscript; available in PMC 2017 May 31.

Published in final edited form as: J Integr Bioinform. 2016 Dec 18; 13(3): 290. Published online 2016 Dec 18. doi: 10.2390/biecoll-jib-2016-290

PMCID:: PMC5451322

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Select item 81058795.

Retinoic Acid Promotes Endothelial Cell Cycle Early G1 State to Enable Human Hemogenic Endothelial Cell Specification

Jingyao Qiu, Sofia Nordling, Hema H. Vasavada, Eugene C. Butcher, Karen K. Hirschi

Cell Rep. Author manuscript; available in PMC 2021 May 8.

Published in final edited form as: Cell Rep. 2020 Dec 1; 33(9): 108465. doi: 10.1016/j.celrep.2020.108465

PMCID:: PMC8105879

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Select item 82864486.

Emergence of neuronal diversity during vertebrate brain development

Bushra Raj, Jeffrey A. Farrell, Jialin Liu, Jakob El Kholtei, Adam N. Carte, Joaquin Navajas Acedo, Lucia Y Du, Aaron McKenna, Đorđe Relić, Jessica M. Leslie, Alexander F. Schier

Neuron. Author manuscript; available in PMC 2021 Dec 23.

Published in final edited form as: Neuron. 2020 Dec 23; 108(6): 1058–1074.e6. Published online 2020 Oct 16. doi: 10.1016/j.neuron.2020.09.023

PMCID:: PMC8286448

Article PDF–3.6M

Select item 79688337.

Temporal mechanisms of myogenic specification in human induced pluripotent stem cells

P. Nayak, A. Colas, M. Mercola, S. Varghese, S. Subramaniam

Sci Adv. 2021 Mar; 7(12): eabf7412. Published online 2021 Mar 17. doi: 10.1126/sciadv.abf7412

PMCID:: PMC7968833

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Select item 93033698.

Regulation of both transcription and RNA turnover contribute to germline specification

Kun Tan, Miles F Wilkinson

Nucleic Acids Res. 2022 Jul 22; 50(13): 7310–7325. Published online 2022 Jul 1. doi: 10.1093/nar/gkac542

PMCID:: PMC9303369

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Select item 94612889.

Integrative network analysis of circular RNAs reveals regulatory mechanisms for hepatic specification of human iPSC-derived endoderm

Fang Bai, Jinliang Duan, Daopeng Yang, Xingqiang Lai, Xiaofeng Zhu, Xiaoshun He, Anbin Hu

Stem Cell Res Ther. 2022; 13: 468. Published online 2022 Sep 8. doi: 10.1186/s13287-022-03160-z

PMCID:: PMC9461288

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Select item 952924710.

RNA-binding protein Elavl1/HuR is required for maintenance of cranial neural crest specification

Erica J Hutchins, Shashank Gandhi, Jose Chacon, Michael Piacentino, Marianne E Bronner

eLife. 2022; 11: e63600. Published online 2022 Oct 3. doi: 10.7554/eLife.63600

PMCID:: PMC9529247

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Select item 791864411.

GATA transcription factors, SOX17 and TFAP2C, drive the human germ-cell specification program

Yoji Kojima, Chika Yamashiro, Yusuke Murase, Yukihiro Yabuta, Ikuhiro Okamoto, Chizuru Iwatani, Hideaki Tsuchiya, Masataka Nakaya, Tomoyuki Tsukiyama, Tomonori Nakamura, Takuya Yamamoto, Mitinori Saitou

Life Sci Alliance. 2021 May; 4(5): e202000974. Published online 2021 Feb 19. doi: 10.26508/lsa.202000974

PMCID:: PMC7918644

Article PDF–4.6M

Select item 759604712.

IFI16 promotes human embryonic stem cell trilineage specification through interaction with p53

Qian He, Zubiao Wu, Wei Yang, Doukou Jiang, Chaofeng Hu, Xiaofei Yang, Ning Li, Furong Li

NPJ Regen Med. 2020; 5: 18. Published online 2020 Oct 29. doi: 10.1038/s41536-020-00104-0

PMCID:: PMC7596047

Article PDF–8.6M

Select item 1088409813.

Wnt signal-dependent antero-posterior specification of early-stage CNS primordia modeled in EpiSC-derived neural stem cells

Kae Nakamura, Yusaku Watanabe, Claire Boitet, Sayaka Satake, Hideaki Iida, Koya Yoshihi, Yasuo Ishii, Kagayaki Kato, Hisato Kondoh

Front Cell Dev Biol. 2023; 11: 1260528. Published online 2024 Feb 9. doi: 10.3389/fcell.2023.1260528

PMCID:: PMC10884098

Article PDF–5.4M

Select item 663678314.

Sox2 and FGF20 interact to regulate organ of Corti hair cell and supporting cell development in a spatially-graded manner

Lu M. Yang, Kathryn S. E. Cheah, Sung-Ho Huh, David M. Ornitz

PLoS Genet. 2019 Jul; 15(7): e1008254. Published online 2019 Jul 5. doi: 10.1371/journal.pgen.1008254

PMCID:: PMC6636783

Article PDF–8.4M

Select item 775568415.

Mechanical tension promotes formation of gastrulation-like nodes and patterns mesoderm specification in human embryonic stem cells

Jonathon M. Muncie, Nadia M.E. Ayad, Johnathon N. Lakins, Xufeng Xue, Jianping Fu, Valerie M. Weaver

Dev Cell. Author manuscript; available in PMC 2021 Dec 21.

Published in final edited form as: Dev Cell. 2020 Dec 21; 55(6): 679–694.e11. Published online 2020 Nov 17. doi: 10.1016/j.devcel.2020.10.015

PMCID:: PMC7755684

Article PDF–3.1M

Select item 1104621016.

Liver specification of human iPSC-derived endothelial cells transplanted into mouse liver

Kiryu K. Yap, Jan Schröder, Yi-Wen Gerrand, Aleksandar Dobric, Anne M. Kong, Adrian M. Fox, Brett Knowles, Simon W. Banting, Andrew G. Elefanty, Eduoard G. Stanley, George C. Yeoh, Glen P. Lockwood, Victoria C. Cogger, Wayne A. Morrison, Jose M. Polo, Geraldine M. Mitchell

JHEP Rep. 2024 May; 6(5): 101023. Published online 2024 Feb 1. doi: 10.1016/j.jhepr.2024.101023

PMCID:: PMC11046210

Article PDF–5.8M

Select item 913522617.

TextFormats: Simplifying the definition and parsing of text formats in bioinformatics

Giorgio Gonnella

PLoS One. 2022; 17(5): e0268910. Published online 2022 May 26. doi: 10.1371/journal.pone.0268910

PMCID:: PMC9135226

Article PDF–769K

Select item 543054418.

Transcription Factor Antagonism Controls Enteroendocrine Cell Specification from Intestinal Stem Cells

Yumei Li, Zhimin Pang, Huanwei Huang, Chenhui Wang, Tao Cai, Rongwen Xi

Sci Rep. 2017; 7: 988. Published online 2017 Apr 20. doi: 10.1038/s41598-017-01138-z

PMCID:: PMC5430544

Article PDF–8.8M

Select item 1065472319.

Fate specification is spatially intermingled across planarian stem cells

Chanyoung Park, Kwadwo E. Owusu-Boaitey, Giselle M. Valdes, Peter W. Reddien

Nat Commun. 2023; 14: 7422. Published online 2023 Nov 16. doi: 10.1038/s41467-023-43267-2

PMCID:: PMC10654723

Article PDF–7.2M

Select item 788904420.

SemiCompRisks: An R Package for the Analysis of Independent and Cluster-correlated Semi-competing Risks Data

Danilo Alvares, Sebastien Haneuse, Catherine Lee, Kyu Ha Lee

R J. Author manuscript; available in PMC 2021 Feb 17.

Published in final edited form as: R J. 2019 Jun; 11(1): 376–400. Published online 2019 Aug 20. doi: 10.32614/rj-2019-038

PMCID:: PMC7889044

Article PDF–811K

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package specification (51967)
PMC
COQ2 coenzyme Q2, polyprenyltransferase [Canis lupus familiaris]
COQ2 coenzyme Q2, polyprenyltransferase [Canis lupus familiaris]
Gene ID:478457

Gene
Caspase-1 deficiency effect on lipid-loaded intestines
Caspase-1 deficiency effect on lipid-loaded intestines
Accession: GDS6176

GEO DataSets
Related DataSets for GEO Profiles (Select 132585922) (1)
GEO DataSets
RecName: Full=Probable dual-specificity RNA methyltransferase RlmN; AltName: Ful...
RecName: Full=Probable dual-specificity RNA methyltransferase RlmN; AltName: Full=23S rRNA (adenine(2503)-C(2))-methyltransferase; AltName: Full=23S rRNA m2A2503 methyltransferase; AltName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=tRNA (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA m2A37 methyltransferase
gi|81373742|sp|Q5YS67.1|RLMN_NOCFA

Protein

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